Over here in the UK I have just had my flies out bike remapped with the stock ECU and taken of the Power Commander.
Found a specialist who can reprogramm original ECU and also has a dyno with RAMAIR:
http://www.dynapro.co.uk/
It also gives real horsepower and torque in real time (Dynojet Dyno's are software based and cannot really measure power and torque accurately)
Check out the PDF's from a magazine interview with dynojet where they admit they could not figure out what a horsepower was!
http://www.dynapro.co.uk/true_hp.htm
Anyway bottom line, this guy could remap the stock ECU (Which apparently is very sophisticated)
I now have :
* Each gear with it's own map
* Each gear map is mapped individually for each cylinder
* Timing has been altered as well as fuelling (Per gear of course)
* Real time road speed RAM Air simulation during mapping
I gained 10BHP whilst I was there, not sure how it compares as the dynojet showed 174.5 when I had it setup last year, the dynapro showed 156BHP on arrival and 166 when I left, I will get it back on the dynojet one some time and see if I am showing over 180 now!
It now seems a lot smoother and ticks over perfectly (it used to hunt - but then they all seem to do that stock) you can't even se the rev needle flicker at idle now!
Power does seem better especially in upper mid-range (6-8k) although not a great gain below 5k from seat of pants or dyno graphs.
It also vibrates a lot less when cruising - no more numb hands!
Cost £350 for the job, in the UK we pay £250 for a PC3 and £150 - £200 for a map, so pretty good, especially as if you throw in the DJ parts for ignition and multiple maps you would spend a fortune.
Apparently he can also alter fly timing, rev limiters and anything else.
For the UK guys try here;
http://www.hilltopmotorcycles.com/
Flies Out \ PC3 \ Autocom \ Kwak Tall Screen \ Helibars \ Kawasaki Rack \ Givi Panniers and Top box (Ugh!) - Quick Detach :-) \ Tank Bag with Power - Magic! \ Novus Rider GPS (Camera Warning System)